scalable minds

Voxelytics Connect
Automatically segment large-scale 3D microscopy image datasets using state-of-the-art AI technologies.
Easily detect synapses and generate dense segmentation of neurons. Developed in collaboration with leading neuroscientists.
Engineered for high throughput on HPC and Cloud environments.
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Voxelytics Align
Align and normalize 3D microscopy image stacks with robust feature matching and outlier detection.
Stitch individual 2D image tiles into a single slices. Dynamic mesh transformations ensure highly accurate reconstructions.
Scales with your data from workstations to HPC clusters or the Cloud.
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webKnossos
webKnossos is the leading in-browser annotation tool for 3D large-scale microscopy data for brain researchers.
Collaboratively work on reconstructing 3D image datasets for your research. Create skeleton and volume annotations at high speed and easily publish them.
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scalable minds is a software engineering company with a strong focus on solutions utilizing powerful AI methods for our clients and research partners. We are experts for large-scale image analysis.
Our team consists of currently 16 exceptional software engineers and data scientists. We all share the passion for artificial intelligence, brain research and solving technical challenges.
We are not afraid to tackle complex challenges. Get in touch with us to learn more.

Blog

BioVision June 4, 2019
Cross-Dataset Segmentation Models
We use ML to segment neural connections in brain tissue. Here we present our findings on the necessary training data and how to reduce it.
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webKnossosFebruary 21, 2019
Importing datasets into webKnossos
This is a tutorial on how to use a TIFF stack with webKnossos. We convert the stack into the WKW format and import it in webKnossos.
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webKnossosFebruary 7, 2019
Volume Annotation in webKnossos
webKnossos features advanced 3D voxel painting functionality which are used to generate ground truth data for automated segmentations.
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